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       2004 Publications
  • Kos, Š.; Millis, A. J.; Larkin, A. I.. Gaussian fluctuation corrections to the BCS mean-field gap amplitude at zero temperature. Physical Review B 2004 10.1103/PhysRevB.70.214531
  • Kevrekidis, P. G.; Dmitriev, S. V.; Takeno, S.; Bishop, A. R., et al. Rich example of geometrically induced nonlinearity: From rotobreathers and kinks to moving localized modes and resonant energy transfer. Physical Review E 2004 10.1103/PhysRevE.70.066627
  • Tretiak, S.; Piryatinski, A.; Saxena, A.; Martin, R. L., et al. On the existence of photoexcited breathers in conducting polymers. Physical Review B 2004 10.1103/PhysRevB.70.233203
  • Paschek, Dietmar; García, Angel E.. Reversible Temperature and Pressure Denaturation of a Protein Fragment: A Replica Exchange Molecular Dynamics Simulation Study. Physical Review Letters 2004 10.1103/PhysRevLett.93.238105
  • Gómez-Gardeñes, J.; Floría, L. M.; Peyrard, M.; Bishop, A. R.. Nonintegrable Schrödinger discrete breathers. Chaos: An Interdisciplinary Journal of Nonlinear Science 2004 10.1063/1.1811991
  • Rivera, Michael K.; Daniel, W. Brent; Ecke, Robert E.. Coherent vortices in two-dimensional turbulence. Chaos: An Interdisciplinary Journal of Nonlinear Science 2004 10.1063/1.1821773
  • Wingate, B. A.. The Maximum Allowable Time Step for the Shallow Water α Model and Its Relation to Time-Implicit Differencing. Monthly Weather Review 2004 10.1175/MWR2816.1
  • Ben-Naim, E.; Redner, S.. Winning quick and dirty: the greedy random walk. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/47/002
  • Kevrekidis, P. G.; Khare, Avinash; Saxena, A.. Solitary wave interactions in dispersive equations using Manton’s approach. Physical Review E 2004 10.1103/PhysRevE.70.057603
  • Mikulis, M.; Reichhardt, C. J. Olson; Reichhardt, C.; Scalettar, R. T., et al. Re-entrant disordering of colloidal molecular crystals on two-dimensional periodic substrates. Journal of Physics: Condensed Matter 2004 10.1088/0953-8984/16/45/013
  • Gonçalves, S.; Kenkre, V. M.; Bishop, A. R.. Nonlinear friction of a damped dimer sliding on a periodic substrate. Physical Review B 2004 10.1103/PhysRevB.70.195415
  • Krichever, I.; Mineev-Weinstein, M.; Wiegmann, P.; Zabrodin, A.. Laplacian growth and Whitham equations of soliton theory. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2004.06.003
  • Hastings, M. B.. An mathsf{epsilon}-expansion for small-world networks. European Physical Journal B - Condensed Matter and Complex Systems 2004 10.1140/epjb/e2004-00383-6
  • Holm, Darryl D.; Putkaradze, Vakhtang; Stechmann, Samuel N.. Rotating concentric circular peakons. Nonlinearity 2004 10.1088/0951-7715/17/6/008
  • Piryatinski, A.; Tretiak, S.; Fenimore, P. W.; Saxena, A., et al. Three-pulse photon-echo spectroscopy as a probe of the photoexcited electronic state manifold in coupled electron-phonon systems. Physical Review B 2004 10.1103/PhysRevB.70.161404
  • Reichhardt, C.; Olson Reichhardt, C. J.. Noise at the Crossover from Wigner Liquid to Wigner Glass. Physical Review Letters 2004 10.1103/PhysRevLett.93.176405
  • Cruz-Pacheco, Gustavo; Levermore, C. David; Luce, Benjamin P.. Complex Ginzburg–Landau equations as perturbations of nonlinear Schrödinger equations: A Melnikov approach. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2004.07.012
  • Kevrekidis, P. G.; Konotop, V. V.; Malomed, B. A.; Bishop, A. R.. Nonlinearity from geometric interactions: A case example. Physical Review E 2004 10.1103/PhysRevE.70.047602
  • Hastings, M. B.. Spin-orbit scattering and time-reversal symmetry: Detection of a spin by tunneling. Physical Review B 2004 10.1103/PhysRevB.70.161301
  • Reichhardt, C.; Reichhardt, C. J. Olson. Dynamic regimes and spontaneous symmetry breaking for driven colloids on triangular substrates. EPL (Europhysics Letters) 2004 10.1209/epl/i2004-10182-9
  • Kalosakas, G.; Rasmussen, K. Ø; Bishop, A. R.; Choi, C. H., et al. Sequence-specific thermal fluctuations identify start sites for DNA transcription. EPL (Europhysics Letters) 2004 10.1209/epl/i2004-10167-8
  • Vanossi, Andrea; Bishop, Alan R.; Franchini, Anna; Bortolani, Virginio. Modelling study of microscopic sliding on irregular substrates. Surface Science 2004 10.1016/j.susc.2004.06.015
  • Hastings, M. B.. Decay of Correlations in Fermi Systems at Nonzero Temperature. Physical Review Letters 2004 10.1103/PhysRevLett.93.126402
  • Rapti, Z.; Trombettoni, A.; Kevrekidis, P. G.; Frantzeskakis, D. J., et al. Modulational instabilities and domain walls in coupled discrete nonlinear Schrödinger equations. Physics Letters A 2004 10.1016/j.physleta.2004.07.052
  • Büttner, H.; Gaididei, Yu B.; Saxena, Avadh; Lookman, Turab, et al. Domain wall junctions as vortices: static structure. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/36/002
  • Shalizi, Cosma Rohilla; Shalizi, Kristina Lisa; Haslinger, Robert. Quantifying Self-Organization with Optimal Predictors. Physical Review Letters 2004 10.1103/PhysRevLett.93.118701
  • Davidson, Bruce A.; Ramazashvili, Revaz; Kos, Simon; Eckstein, James N.. Broken Particle-Hole Symmetry at Atomically Flat a-Axis YBa2Cu3O7-δ Interfaces. Physical Review Letters 2004 10.1103/PhysRevLett.93.107004
  • KAMENEV, D. I.; BERMAN, G. P.; KASSMAN, R. B.; TSIFRINOVICH, V. I.. MODELING FULL ADDER IN ISING SPIN QUANTUM COMPUTER WITH 1000 QUBITS USING QUANTUM MAPS. International Journal of Quantum Information 2004 10.1142/S0219749904000304
  • Franco, Ignacio; Tretiak, Sergei. Electron-Vibrational Dynamics of Photoexcited Polyfluorenes. Journal of the American Chemical Society 2004 10.1021/ja0489285
  • Qiao, Zhijun. Integrable Hierarchy, 3×3 Constrained Systems, and Parametric Solutions. Acta Applicandae Mathematica 2004 10.1023/B:ACAP.0000038872.88367.dd
  • BERMAN, G. P.; KAMENEV, D. I.; TSIFRINOVICH, V. I.. MINIMIZATION OF NONRESONANT EFFECTS IN A SCALABLE ISING SPIN QUANTUM COMPUTER. International Journal of Quantum Information 2004 10.1142/S0219749904000286
  • Kiss, I. Z.; Merkin, J. H.; Neufeld, Z.. Homogenization induced by chaotic mixing and diffusion in an oscillatory chemical reaction. Physical Review E 2004 10.1103/PhysRevE.70.026216
  • Koudella, Christophe R.; Neufeld, Zoltán. Reaction front propagation in a turbulent flow. Physical Review E 2004 10.1103/PhysRevE.70.026307
  • Fuentes, M. A.; Maniadis, P.; Kalosakas, G.; Rasmussen, K. Ø., et al. Multipeaked polarons in soft potentials. Physical Review E 2004 10.1103/PhysRevE.70.025601
  • Reichhardt, Charles M.; Olson Reichhardt, Cynthia J.. Statics and dynamics of colloidal particles in periodic traps. Proc. SPIE 5514, Optical Trapping and Optical Micromanipulation 2004 10.1117/12.558964
  • Chang, Chun-Min; Castro Neto, A. H; Bishop, A. R. Long-range charge transfer in periodic DNA through polaron diffusion. Chemical Physics 2004 10.1016/j.chemphys.2004.05.015
  • Tiampo, K. F.; Rundle, J. B.; Klein, W.; Ben-Zion, Y., et al. Using Eigenpattern Analysis to Constrain Seasonal Signals in Southern California. Pure and Applied Geophysics 2004 10.1007/s00024-004-2545-y
  • Tiampo, K. F.; Rundle, J. B.; Klein, W.; Martins, J. S. Sá. Ergodicity in Natural Fault Systems. Pure and Applied Geophysics 2004 10.1007/s00024-004-2542-1
  • Bishop, A. R. Doped transition metal oxides: networks of local distortions correlated by elastic fields. Journal of Physics and Chemistry of Solids 2004 10.1016/j.jpcs.2003.07.002
  • Fabijonas, Bruce R.; Holm, Darryl D.. Euler–Poincaré formulation and elliptic instability for nth-gradient fluids. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/30/015
  • Bourdel, T.; Khaykovich, L.; Cubizolles, J.; Zhang, J., et al. Experimental Study of the BEC-BCS Crossover Region in Lithium 6. Physical Review Letters 2004 10.1103/PhysRevLett.93.050401
  • Chowell, G.; Hengartner, N. W.; Castillo-Chavez, C.; Fenimore, P. W., et al. The basic reproductive number of Ebola and the effects of public health measures: the cases of Congo and Uganda. Journal of Theoretical Biology 2004 10.1016/j.jtbi.2004.03.006
  • Vanossi, Andrea; Bishop, Alan R.; Bortolani, Virginio. Role of substrate geometry in sliding friction. Nanotechnology 2004 10.1088/0957-4484/15/7/013
  • Bussmann-Holder, A.; Bishop, A. R.. Intrinsic local modes and heterogeneity in relaxor ferroelectrics. Journal of Physics: Condensed Matter 2004 10.1088/0953-8984/16/25/L02
  • Berman, G. P.; Bishop, A. R.; Borgonovi, F.; Dalvit, D. A. R.. Survival of quantum effects for observables after decoherence. Physical Review A 2004 10.1103/PhysRevA.69.062110
  • Aivalis, Konstantinos G.; Kurien, Susan; Schumacher, Jörg; Sreenivasan, Katepalli R.. Sign-symmetry of temperature structure functions. Physical Review E 2004 10.1103/PhysRevE.69.066315
  • Kurien, Susan; Taylor, Mark A.; Matsumoto, Takeshi. Cascade time scales for energy and helicity in homogeneous isotropic turbulence. Physical Review E 2004 10.1103/PhysRevE.69.066313
  • Batista, C. D.; Aligia, A. A.. Exact Bond Ordered Ground State for the Transition between the Band and the Mott Insulator. Physical Review Letters 2004 10.1103/PhysRevLett.92.246405
  • Lin, Anna L.; Hagberg, Aric; Meron, Ehud; Swinney, Harry L.. Resonance tongues and patterns in periodically forced reaction-diffusion systems. Physical Review E 2004 10.1103/PhysRevE.69.066217
  • Olson Reichhardt, C. J.; Reichhardt, C.; Martin, I.; Bishop, A. R.. Dynamics and melting of stripes, crystals, and bubbles with quenched disorder. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2004.01.027
  • Jarzynski, Christopher; Wójcik, Daniel K.. Classical and Quantum Fluctuation Theorems for Heat Exchange. Physical Review Letters 2004 10.1103/PhysRevLett.92.230602
  • Ben-Naim, E.; Krapivsky, P. L.. Random geometric series. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/23/001
  • BERMAN, G. P.; KAMENEV, D. I.; TSIFRINOVICH, V. I.. ANALYTIC SOLUTIONS FOR QUANTUM LOGIC GATES AND MODELING PULSE ERRORS IN A QUANTUM COMPUTER WITH A HEISENBERG INTERACTION. International Journal of Quantum Information 2004 10.1142/S0219749904000237
  • Jorge, G. A.; Jaime, M.; Civale, L.; Batista, C. D., et al. Thermodynamic properties of excess-oxygen-doped La2CuO4.11 near a simultaneous transition to superconductivity and long-range magnetic order. Physical Review B 2004 10.1103/PhysRevB.69.174506
  • Reichhardt, C.; Reichhardt, C. J. Olson; Hastings, M. B.. Nonlinear dynamics, rectification, and phase locking for particles on symmetrical two-dimensional periodic substrates with dc and circular ac drives. Physical Review E 2004 10.1103/PhysRevE.69.056115
  • Rasmussen, Kim O.; Kalosakas, George; Voulgarakis, N. K.; Bishop, Alan R., et al. Thermally induced coherent vibrations in DNA. Proc. SPIE 5467, Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems II 2004 10.1117/12.548416
  • Reichhardt, Charles M.. Noise near charge ordering transitions. Proc. SPIE 5469, Fluctuations and Noise in Materials 2004 10.1117/12.546861
  • Eubank, Stephen; Guclu, Hasan; Anil Kumar, V. S.; Marathe, Madhav V., et al. Modelling disease outbreaks in realistic urban social networks. Nature 2004 10.1038/nature02541
  • Ben-Naim, E.; Krapivsky, P. L.. Size of outbreaks near the epidemic threshold. Physical Review E 2004 10.1103/PhysRevE.69.050901
  • Choi, Wooyoung; Prasad, Dilip; Camassa, Roberto; Ecke, Robert E.. Traveling waves in rotating Rayleigh-Bénard convection. Physical Review E 2004 10.1103/PhysRevE.69.056301
  • Ben-Naim, E.; Krapivsky, P. L.. Unicyclic components in random graphs. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/18/L01
  • Batista, C. D.; Gubernatis, J. E.; Bonča, J.; Lin, H. Q.. Intermediate Coupling Theory of Electronic Ferroelectricity. Physical Review Letters 2004 10.1103/PhysRevLett.92.187601
  • Ares, S.; Sánchez, A.; Bishop, A. R.. Super-roughening as a disorder-dominated flat phase. EPL (Europhysics Letters) 2004 10.1209/epl/i2004-10021-1
  • Olson Reichhardt, C. J.; Reichhardt, C.; Hastings, M. B.; Jankó, B.. Ratchet superconducting vortex cellular automata. Physica C: Superconductivity 2004 10.1016/j.physc.2003.11.040
  • Reichhardt, C.; Olson Reichhardt, C. J.. Ratchet effects for vortices in superconductors with periodic pinning arrays. Physica C: Superconductivity 2004 10.1016/j.physc.2003.09.094
  • Reichhardt, C.; Olson Reichhardt, C. J.. Directional locking effects and dynamics for particles driven through a colloidal lattice. Physical Review E 2004 10.1103/PhysRevE.69.041405
  • Ben-Naim, E.; Krapivsky, P. L.. Finite-size fluctuations in interacting particle systems. Physical Review E 2004 10.1103/PhysRevE.69.046113
  • Fehske, H.; Wellein, G.; Hager, G.; Weiße, A., et al. Quantum lattice dynamical effects on single-particle excitations in one-dimensional Mott and Peierls insulators. Physical Review B 2004 10.1103/PhysRevB.69.165115
  • Olson Reichhardt, C. J.; Hastings, M. B.. Do Vortices Entangle?. Physical Review Letters 2004 10.1103/PhysRevLett.92.157002
  • Toroczkai, Zoltán; Bassler, Kevin E.. Network dynamics: Jamming is limited in scale-free systems. Nature 2004 10.1038/428716a
  • McMahon, Benjamin H.; Fabian, Marian; Tomson, Farol; Causgrove, Timothy P., et al. FTIR studies of internal proton transfer reactions linked to inter-heme electron transfer in bovine cytochrome c oxidase. Biochimica et Biophysica Acta (BBA) - Bioenergetics 2004 10.1016/j.bbabio.2004.01.007
  • Zhang, J.; Li, N.. Analytical Solution on the Transient Corrosion/Precipitation in Non-Isothermal Liquid Lead Bismuth Eutectic Flow Loops. Corrosion 2004 10.5006/1.3287739
  • Voulgarakis, N. K.; Kalosakas, G.; Rasmussen, K. Ø.; Bishop, A. R.. Temperature-Dependent Signatures of Coherent Vibrational Openings in DNA. Nano Letters 2004 10.1021/nl0499084
  • Zhang, Jinsuo; Li, Ning. Heterogeneous ECE Processes at Channel Electrodes: Analytical Solution for all Reaction Rate Constants and Different Diffusion Coefficients. Electroanalysis 2004 10.1002/elan.200302856
  • Fabijonas, Bruce R.; Holm, Darryl D.. Craik–Criminale solutions and elliptic instability in nonlinear-reactive closure models for turbulence. Physics of Fluids (1994-present) 2004 10.1063/1.1638750
  • Hastings, M. B.. Lieb-Schultz-Mattis in higher dimensions. Physical Review B 2004 10.1103/PhysRevB.69.104431
  • Kalosakas, G.; Rasmussen, K. Ø.; Bishop, A. R.. Nonlinear excitations in DNA: polarons and bubbles. Synthetic Metals 2004 10.1016/j.synthmet.2003.08.020
  • Choi, Chu H.; Kalosakas, George; Rasmussen, Kim Ø; Hiromura, Makoto, et al. DNA dynamically directs its own transcription initiation. Nucleic Acids Research 2004 10.1093/nar/gkh335
  • Zhang, Jinsuo; Li, Ning. Corrosion/precipitation in non-isothermal and multi-modular LBE loop systems. Journal of Nuclear Materials 2004 10.1016/j.jnucmat.2004.01.013
  • Dullin, H. R.; Gottwald, G. A.; Holm, D. D.. On asymptotically equivalent shallow water wave equations. Physica D: Nonlinear Phenomena 2004 10.1016/j.physd.2003.11.004
  • Reichhardt, C.; Reichhardt, C. J. Olson. Local Melting and Drag for a Particle Driven through a Colloidal Crystal. Physical Review Letters 2004 10.1103/PhysRevLett.92.108301
  • Kozma, B.; Hastings, M. B.; Korniss, G.. Roughness Scaling for Edwards-Wilkinson Relaxation in Small-World Networks. Physical Review Letters 2004 10.1103/PhysRevLett.92.108701
  • Tsai, Peichun; Daya, Zahir A.; Morris, Stephen W.. Aspect-Ratio Dependence of Charge Transport in Turbulent Electroconvection. Physical Review Letters 2004 10.1103/PhysRevLett.92.084503
  • Krapivsky, P. L.; Ben-Naim, E.; Grosse, I.. Stable distributions in stochastic fragmentation. Journal of Physics A: Mathematical and General 2004 10.1088/0305-4470/37/8/002
  • Anghel, M.; Toroczkai, Zoltán; Bassler, Kevin E.; Korniss, G.. Competition-Driven Network Dynamics: Emergence of a Scale-Free Leadership Structure and Collective Efficiency. Physical Review Letters 2004 10.1103/PhysRevLett.92.058701
  • Rasmussen, Steen; Chen, Liaohai; Stadler, Bärbel M. R.; Stadler, Peter F.. Proto-Organism Kinetics: Evolutionary Dynamics of Lipid Aggregates with Genes and Metabolism. Origins of life and evolution of the biosphere 2004 10.1023/B:ORIG.0000009838.16739.40
  • Rapti, Z.; Kevrekidis, P. G.; Smerzi, A.; Bishop, A. R.. Variational approach to the modulational instability. Physical Review E 2004 10.1103/PhysRevE.69.017601
  • Berman, G. P.; Borgonovi, F.; Izrailev, F. M.; Smerzi, A.. Irregular Dynamics in a One-Dimensional Bose System. Physical Review Letters 2004 10.1103/PhysRevLett.92.030404
  • ZHANG, Jinsuo; LI, Ning. A Correlation for Steel Corrosion in Non-isothermal LBE Loops. Journal of Nuclear Science and Technology 2004 10.1080/18811248.2004.9715483
  • Ahluwalia, R.; Lookman, T.; Saxena, A.; Shenoy, S.R.. Pattern formation in Ferroelastic Transitions. Phase Transitions 2004 10.1080/01411590410001672620
  • Fabijonas, Bruce R.; Holm, Darryl D.. Multi-frequency CraikStokes equations. Journal of Fluid Mechanics 2004 10.1017/S0022112004008511
  • Ben-Naim, E.; Krapivsky, P. L.. Leadership statistics in random structures. EPL (Europhysics Letters) 2004 10.1209/epl/i2003-10081-7
  • Li, J.; Zhou, Y.; Ma, Z.; Hyman, J.. Epidemiological Models for Mutating Pathogens. SIAM Journal on Applied Mathematics 2004 10.1137/S0036139903430185
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