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CNLS Talks, 2005
• 2005-12-15 Joel Miller (T-7) Interfacial instabilities of elastic fluids in shear flow
• 2005-12-15 Serguei Goupalov (T-CNLS) Raman scattering from single-walled carbon nanotubes
• 2005-12-15 Cynthia Reichhardt (T-12) Boolean models for genetic regulatory networks
• 2004-12-14 10:00 AM - 2005-12-14 11:00 AM Kelvin Chu (University of Vermont) Reaction Intermediates in the Blood-Substitute candidate
• 2005-12-13 Adrian Jinich (Northwestern University) Protein distribution in E. coli
• 2005-12-12 Franz Mertens (University of Bayreuth) Soliton ratchets in extended nonlinear systems and their optimization
• 2005-12-12 David Chua (Boston University, Statistics Department) Network Kriging
• 2005-12-08 Jernej Stare (LANSCE-12) Analytical Full-Dimensional Potential Energy Surface
• 2005-12-07 Steven P. Mielke (Biophysics Graduate Group, UC Davis) Computer simulations of sequence-dependent duplex denaturation in dynamically superhelical DNA
• 2005-12-05 Juyong Park (University of Michigan) Statistical Mechanics of Networks
• 2005-12-05 Tom Loughin (Kansas State University) Modeling Association Between Two or More Multiple-Response Categorical Variables
• 2005-11-23 Guglielmo Scovazzi (Sandia National Laboratories) A Multiscale Stabilized Method for
• 2005-11-22 Prof. Don Estep (Colorado State University) Accounting for stability: a posteriori error estimates based on residuals and variational analysis
• 2005-11-17 Jelena Stajic (T-CNLS) Mathematical models of two gene circuits with positive feedback
• 2005-11-17 Zoltan Toroczkai (T-CNLS) Efficient, adaptive, congestion-aware routing on power law graphs
• 2005-11-16 Kate Evans, Dana Knoll, Mike Pernice (T-3, CCS-2) Development of a 2-D model to accurately simulate phase transitions for long time integration
• 2005-11-14 Jan Wehr (Department of Mathematics, University of Arizona) Can Disorder Lead to Order?
• 2005-11-10 Colm Connaughton (T-CNLS) "Condensation" of energy in 2 dimensional turbulence
• 2005-11-10 Matthew Hastings (T-13) Systematic Series Expansions for Processes on Networks
• 2005-11-07 LP Decoding, Code Polytopes and Minimal Codewords
• 2005-11-07 Snezhana I. Abarzhi (Center for Turbulence Research, Stanford) Turbulent mixing and beyond
• 2005-11-03 Andrei Piryatinski (CNLS) Photoexcited Wavepacket Scattering on Conical Intersections: Semiclassical Expansion
• 2005-11-02 Graham F. Carey (ICES) Adaptive Meshing and Modeling
• 2005-10-26 Professor Spiridoula Matsika (Department of Chemistry, Temple University) Conical Intersections in Photochemistry and Photophysics
• 2005-10-26 Hyung Taek Ahn (University of Texas) Geometrically Conservative ALE scheme with Unstructured General Hybrid Meshes
• 2005-10-18 A. Zabrodin (Inst. for Thoretical and Experimental Physics) Growth processes and integrable systems
• 2005-10-13 Dirk Kadau (University of Oslo, Norway) Gas-grain simulations: the "Quicksand-Effect"
• 2005-10-11 Katrin G. Gelfert (Max Planck Institute for the Physics of Complex Systems) Topological pressure via saddle periodic points
• 2005-10-11 Gunnar Pruessner (Virginia Polytechnic Institute) Non-Perturbative Renormalisation Group for Critical Dynamics
• 2005-10-06 Dr. Eivind Almaas (Lawrence Livermore National Laboratory) Cellular Utilization of Metabolic Networks
• 2005-10-06 Yogesh N. Joglekar (T-11) Excitonic condensate and quasiparticle transport in bilayer electron-hole systems
• 2005-10-03 Dr. Michael Zingale (University of California at Santa Cruz) The Physics of Flames in Type Ia Supernovae
• 2005-09-29 Ben Goertzel (Virginia Polytechnic Institute and Biomind LLC) Global Optimization of Java Programs via Supercompilation
• 2005-09-29 Masanori Nakamura (X-1) Poynting Flux-dominated Jets from Active Galactic Nuclei
• 2005-09-29 Ben Goertzel (Virginia Polytechnic Institute and Biomind LLC) Extracting Biological Meaning from Gene Expression and/or Mutation Data Using Machine Learning and Ontologies
• 2005-09-28 Konstantin Lipnikov & Mikhail Shashkov (T-7) The new error minimization based moving mesh method: theoretical and numerical analysis
• 2005-09-21 R.G. Schmitt (Sandia National Laboratories) The Role of Volume Fraction in Shock Physics Analysis
• 2005-09-13 Jing-Xian Lin (University of California, Riverside) Heterogeneities in pinned liquids
• 2005-09-12 Zoltan Neda (Babes-Bolyai University) Spring-block type models for capillarity-driven self-organized nanostructures
• 2005-09-12 Professor Wolfgang Wagner (Weierstrass Institute) Stochastic models and Monte Carlo algorithms for nonlinear kinetic equations
• 2005-09-08 Dev Rajnarayan (Stanford and Los Alamos Bioscience Division) Beyond Genetic Algorithms and Simulated Annealing -- Formalizing EDAs With Probability Collectives
• 2005-09-06 Dr. Shlomo Havlin (Bar-Ilan University) Self-similarity of complex networks
• 2005-09-06 Svetlana Kilina (University of Washington) Excitonic and vibrational effects in carbon nanotubes
• 2005-09-01 Erzsébet Ravasz (T-13) Protein Folding and Networks
• 2005-09-01 Colin Fox (The University of Auckland) Deterministic Sampling for Bayesian Inference
• 2005-08-31 K.B. Blagoev (Los Alamos National Laboratory) Self-healing and protection mechanisms of DNA
• 2005-08-30 Andras Libal (T-12 & University of Notre Dame) Dynamics, Rectification and Fractionalization for Colloids on Flashing Substrates
• 2005-08-30 Pedro Cano (Universitat Pompeu Fabra) Music Recommendation Networks
• 2005-08-29 Wendy Zhang (University of Chicago) Rounded ends and Near Cusps: transition dynamics in selective withdrawal
• 2005-08-25 Adilson Motter (T-13) Cascade Control and Defense in Complex Networks
• 2005-08-25 Norman J. Zabusky (Rutgers University) Measures of Chaos and Equipartition in Integrable and Nonintegrable Lattices
• 2005-08-24 K.B. Blagoev (Los Alamos National Laboratory) Self-healing and protection mechanisms of DNA
• 2005-08-24 Pradeep Kumar (University of Florida) Higher Order Phase Transitions
• 2005-08-23 Joel L. Lebowitz (Rutgers University) The Role of Entropy in the Time Evolution of Macroscopic Systems
• 2005-08-22 Benjamin Davidovitch (Harvard University) Shear banding in complex fluids: Hints from colloidal crystals
• 2005-08-18 Pawel Weronski (T-7) Molecular Dynamics Study of a Small PNA Molecule in a Lipid-Water System
• 2005-08-18 E. Schwegler (Lawrence Livermore National Laboratory) Structural and dynamical properties of water under ambient and high-pressure conditions
• 2005-08-17 Mark D. Carrara (X-4) Toward Filtered Density Function (FDF) Modeling of Turbulent Energetic Multiphase Flows with Application to Advanced Munitions Development
• 2005-08-16 Jing-Xian Lin (University of California, Riverside) Heterogeneities in pinned liquids
• 2005-08-11 Jean-Luc Thiffeault (Imperial College London) Using Topology to quantify mixing in 2D flows
• 2005-08-11 Kostya Turitsyn (Landau Institute for Theoretical Physics, Moscow, Russia) Nonlinear limits to Shannon channel capacity
• 2005-08-11 S Madsen (Orsted Technical University of Denmark) 1
• 2005-08-11 David H. Wolpert (NASA Ames Research Center) On the computational capabilities of physical systems
• 2005-08-10 Sue King (IM-1) How to give a good talk
• 2005-08-10 David H. Wolpert and William Macready (NASA Ames) Self-dissimilarity: an empirical complexity signature
• 2005-08-09 Evelyn Lunasin (UC San Diego) The Navier-Stokes alpha analytic subgrid scale model for turbulence in two dimensions.
• 2005-08-09 Ishani Roy (Department of Mathematics & Statistics, University of Massachusetts) Being discrete and nonlinear: comparative study of different discretizations of the phi^4 model
• 2005-08-09 Andrea Asztalos (Department of Physics, University of Notre Dame) Gene regulatory network
• 2005-08-09 James Bagrow (Clarkson University) New Statistics for Efficient Network Analysis
• 2005-08-08 Gary Sandine (T-7) GNU/Linux system "mirroring"
• 2005-08-08 David Sherrington (University of Oxford) The Minority Game: statistical physics of adaptive cooperation of speculative agents in a market.
• 2005-08-08 Excited State Processes in Electronic and Bio Nanomaterials
• 2005-08-05 James Bagrow (Clarkson University) New Statistics for Efficient Network Analysis
• 2005-08-05 Maxim Shkarayev (University of Arizona) Maxim ShkarayevFluctuation of error rates in high speed optical fibers links
• 2005-08-05 Patrick Barrow (UC Berkeley) Geometric Measure Techniques for Analysis and Regularization of Images
• 2005-08-04 Sergey Vergeles (Landau Institute) Statistics of magnetic force in kinematic dynamo
• 2005-08-04 Tanya Kostova -Vassilevska (Lawrence Livermore National Laboratory) On the application of a majorization theorem to some epidemic models .. and more
• 2005-08-03 Prof. Jason Haugh (North Carolina State University) Reaction/Diffusion in Intracellular Signal Transduction: a Multi-scale Case Study
• 2005-08-01 Daniil Svyatskiy (University of Houston) Multigrid Solver for Diffusion-type Problems on Unstructured Polyhedral Meshes
• 2005-08-01 Ben Kunsberg (Johns Hopkins University) Using cluster analysis to identify risk factors in Foot-and-Mouth disease spread
• 2005-08-01 Prof. Daniel Ben-Avraham (Clarkson University) What is Special about Diffusion in Scale-Free Nets?
• 2005-08-01 Prof. Christof Koch (Caltech) Encoding and Decoding Visual Responses from Neurons in the Human Brain
• 2005-08-01 Dr Melvin Leok (University of Michigan) Computational Geometric Mechanics, Generalized Galerkin
• 2005-08-01 Gary Sandine (T-7) File synchronization, snapshots, and backups with rsync
• 2005-07-29 Prof. Jeremy Edwards (University of New Mexico) Computational and High Throughput Experimantal Analysis of Integrated Protein Function
• 2005-07-28 Sameet Sreenivasan (Boston University) Effect of Network Topology and Routing Strategies on Congestion.
• 2005-07-28 Violeta J. Beleva (T-CNLS, The John Hopkins University) All-Atom Simulations of Thermally Induced Denaturation in DNA
• 2005-07-28 Misha Stepanov (T-13) Analyzing performace of future error-correcting codes
• 2005-07-27 A.C. Vaiana (Institut de Biologie Moléculaire et Cellulaire du CNRS Modélisation et simulations des Acides Nucléiques) Hydration of an Aminoglycoside-RNA Complex Investigated by Molecular Dynamics Simulations
• 2005-07-27 Kevin E. Bassler (University of Houston) Canalization in Boolean Networks and its Evolution, Part 2
• 2005-07-27 Phase transitions or crossovers?
• 2005-07-26 Milos Ivkovic (University of Arizona) Achievable Information Rates for High-Speed Long-Haul Optical Transmission
• 2005-07-26 Yi Sun (Princeton University) Multi-scale Methods for Interface Tracking
• 2005-07-26 Svetlana Kilina (University of Washington) Excitonic and vibrational effects in carbon nanotubes
• 2005-07-25 Jared Barber (University of Arizona) A Lagrangian Approach to Shoreline Tracking in the Numerical Integration of Shallow Water Waves
• 2005-07-25 Matt Rissler (University of Notre Dame) Modeling Swarming of Myxococcus Xanthus
• 2005-07-22 Discrete- and Continuous-time Transgenic Mosquito Population
• 2005-07-21 The Open Quantum-Classical Transition
• 2005-07-21 Lidia A. Braunstein (University of Mar Del Plata) Length of the Optimal Path in Disordered Complex Network
• 2005-07-19 Dev Rajnarayan (Stanford University) Randomized Optimization using Probability Collectives
• 2005-07-18 B. Guerts (University of Twente) Multi-Scale Interactions in Turbulent Flows
• 2005-07-15 Peter Constantin (University of Chicago) Nonlinear Fokker-Planck and Navier-Stokes Equations
• 2005-07-15 Pieter Swart (T-7) Analyzing dynamics on complex networks: a computational
• 2005-07-14 Austin Minnich (UC Berkeley) Behavior of Sedimenting Spheres
• 2005-07-14 Vortex Stretching and Reconnection in a Compressible Fluid
• 2005-07-14 Bruce A. Mork (Michigan Technological University) Chaos and Non-Linear Dynamics - Application to Electrical Power Distribution Systems
• 2005-07-14 Maxim Shkarayev (University of Arizona) Fluctuation of error rates in high speed optical fibers links
• 2005-07-13 Edriss Titi (Weizmann Institute & University of California, Irvine) Global Regularity for the Three-dimensional Primitive Equations of Ocean and Atmosphere Dynamics
• 2005-07-12 Aurore Naso (University of Twente) Geometry and statistics in turbulence
• 2005-07-12 Sergey Vergeles (Landau Institute) Turbulent dynamo: from kinematic stage to saturated one.
• 2005-07-11 Takashi Nishikawa (Southern Methodist University) Synchronization of Scale-free Oscillator Networks
• 2005-07-08 Rajan Gupta (T-8) HIV/AIDS and the future of the poor, illiterate, and marginalized populations
• 2005-07-07 Andras Libal (University of Notre Dame) Colloid system dynamics in the presence of a flashing potential
• 2005-07-07 Bruno Goncalaves (Emory University) Ensemble inequivalence of Spin Systems on Graphs
• 2005-07-07 Eduardo Lopez (T-13) Anomalous transport in scale-free networks
• 2005-07-06 José Carlos Merino Mombach (Unisinos - Brazil) Simple Method to Find Essential Enzymes in Metabolic Networks
• 2005-07-05 James A. Glazier (Indiana University) Modeling Biological Development using the Cellular Potts Model
• 2005-06-30 Ping Yang (Michigan Technological University) Quantum Chemistry of CdSe Quantum Dots -- ligands binding to the surface of clusters
• 2005-06-23 Alberto Puliafito (CNRS - Institut Non Linéaire de Nice) Polymers in linear shear flow: a numerical study
• 2005-06-06 Implicit-Explicit Time Discretization Methods
• 2005-05-31 Aric Hagberg (T-7) An introduction to Python for scientific computing
• 2005-05-27 Vassili Ivanov (UC Los Angeles) Statistical mechanics of DNA melting: What are the most relavant degrees of free
• 2005-05-25 Sean M. Decatur (Mount Holyoke College) Isotope-Edited infrared Spectroscopy as a probe of Amyloid Structure and Dynamics
• 2005-05-24 Ioana Bena (University of Geneva) Dichotomous Markov Noise: An Overview Of Exact Results
• 2005-05-23 William R. Young (UC San Diego) Horizontal Convection and the Mechanical Energy Budget of the Ocean
• 2005-02-03 Chien-Feng Huang (CNLS) A Comparative Study of Probability Collectives Based Multiagent Systems and Genetic Algorithms
• 2005-01-21 Huidan Yu (Texas A&M Aerospace Engineering) Lattice Boltzmann Equation Simulations of Mixing and Reaction
• 2005-01-20 Jernej Stare (LANSCE-12) Advanced computational treatment of short hydrogen bonds: theory & applications
• 2005-01-20 Sergei Chumakov (University of Wisconsin-Madison) Dynamic Structure Models for Large Eddy Simulation
• 2005-01-19 Michelle D. Quirk (D-4) Fuzzy Games, (Decision making under extreme uncertainty)
• 2005-01-13 Praveen Ramaprabhu (X-4) Numerical simulations of Rayleigh-Taylor flows

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